PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100230740051
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family AP2
Protein Properties Length: 455aa    MW: 51089.6 Da    PI: 8.5309
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100230740051genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.55.3e-16275326155
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   s y+GV++++++grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  Ote100230740051|100230740051 275 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 326
                                   57****************988532...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.5E-6137246IPR001471AP2/ERF domain
PROSITE profilePS5103212.194137240IPR001471AP2/ERF domain
SuperFamilySSF541711.44E-9206242IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-9207241IPR001471AP2/ERF domain
CDDcd000181.23E-11208242No hitNo description
PfamPF008472.1E-10275326IPR001471AP2/ERF domain
CDDcd000183.92E-11275334No hitNo description
SuperFamilySSF541716.54E-18275335IPR016177DNA-binding domain
SMARTSM003803.2E-31276340IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-18276334IPR001471AP2/ERF domain
PROSITE profilePS5103219.203276334IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MCSSLRSWRT SSPAAAATPR RLKTXXXXXX XXXXYDHQQQ PYFSNGEQQD LKTIIGFQAF  60
STNSDDSAFA AQTQSPVEST GELVAYSHCP ISATTNNGLS LDVXXXXXXX XXXXTIVSAD  120
SESCKKIADT FGQRTSIYRG VTREVFADVE CDADIDGQED MKRIYGITAV EERAKQEKGV  180
KVQLDFKFLF TLSHSVFFLG GIIINSPIYL GGYDKEDKAA RAYDLAALKY WGSTATTNFP  240
ISNYSKEVEE MKHMTKQEFI ASLRRKSSGF SRGASIYRGV TRHHQQGRWQ ARIGRVAGNK  300
DLYLGTFATE EEAAEAYDIA AIKFRGMNAV TNFEMNRYDV EAIAKSPLPI GGTAKRLKLC  360
VEAXXXXXXX XXASEQHPPN SXXXXXXXXX XFCGYSASFD YPLWSALRQL DPILSPPPLP  420
PHVRQQRRHL RHFQLSESDV HTRRVLRLAS PLLLT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011097469.11e-126PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 isoform X1
SwissprotQ6PQQ44e-91BBM_ARATH; AP2-like ethylene-responsive transcription factor BBM
TrEMBLA0A022QWJ51e-122A0A022QWJ5_ERYGU; Uncharacterized protein
STRINGGLYMA01G02760.11e-105(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25802449